Refactor PGVector to Use Internal Connection Pools and Context Managers (#3373)
This commit is contained in:
@@ -11,12 +11,14 @@ class PGVectorConfig(BaseModel):
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password: Optional[str] = Field(None, description="Database password")
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password: Optional[str] = Field(None, description="Database password")
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host: Optional[str] = Field(None, description="Database host. Default is localhost")
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host: Optional[str] = Field(None, description="Database host. Default is localhost")
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port: Optional[int] = Field(None, description="Database port. Default is 1536")
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port: Optional[int] = Field(None, description="Database port. Default is 1536")
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diskann: Optional[bool] = Field(True, description="Use diskann for approximate nearest neighbors search")
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diskann: Optional[bool] = Field(False, description="Use diskann for approximate nearest neighbors search")
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hnsw: Optional[bool] = Field(False, description="Use hnsw for faster search")
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hnsw: Optional[bool] = Field(True, description="Use hnsw for faster search")
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minconn: Optional[int] = Field(1, description="Minimum number of connections in the pool")
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maxconn: Optional[int] = Field(5, description="Maximum number of connections in the pool")
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# New SSL and connection options
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# New SSL and connection options
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sslmode: Optional[str] = Field(None, description="SSL mode for PostgreSQL connection (e.g., 'require', 'prefer', 'disable')")
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sslmode: Optional[str] = Field(None, description="SSL mode for PostgreSQL connection (e.g., 'require', 'prefer', 'disable')")
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connection_string: Optional[str] = Field(None, description="PostgreSQL connection string (overrides individual connection parameters)")
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connection_string: Optional[str] = Field(None, description="PostgreSQL connection string (overrides individual connection parameters)")
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connection_pool: Optional[Any] = Field(None, description="psycopg2 connection pool object (overrides connection string and individual parameters)")
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connection_pool: Optional[Any] = Field(None, description="psycopg connection pool object (overrides connection string and individual parameters)")
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@model_validator(mode="before")
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@model_validator(mode="before")
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def check_auth_and_connection(cls, values):
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def check_auth_and_connection(cls, values):
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@@ -32,9 +34,9 @@ class PGVectorConfig(BaseModel):
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user, password = values.get("user"), values.get("password")
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user, password = values.get("user"), values.get("password")
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host, port = values.get("host"), values.get("port")
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host, port = values.get("host"), values.get("port")
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if not user and not password:
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if not user and not password:
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raise ValueError("Both 'user' and 'password' must be provided when not using connection_string or connection_pool.")
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raise ValueError("Both 'user' and 'password' must be provided when not using connection_string.")
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if not host and not port:
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if not host and not port:
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raise ValueError("Both 'host' and 'port' must be provided when not using connection_string or connection_pool.")
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raise ValueError("Both 'host' and 'port' must be provided when not using connection_string.")
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return values
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return values
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@model_validator(mode="before")
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@model_validator(mode="before")
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+196
-160
@@ -1,28 +1,28 @@
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import json
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import json
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import logging
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import logging
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from typing import List, Optional
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from contextlib import contextmanager
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from typing import Any, List, Optional
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from pydantic import BaseModel
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from pydantic import BaseModel
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# Try to import psycopg (psycopg3) first, then fall back to psycopg2
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# Try to import psycopg (psycopg3) first, then fall back to psycopg2
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try:
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try:
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import psycopg
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from psycopg import execute_values
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from psycopg.types.json import Json
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from psycopg.types.json import Json
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from psycopg_pool import ConnectionPool
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PSYCOPG_VERSION = 3
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PSYCOPG_VERSION = 3
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logger = logging.getLogger(__name__)
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logger = logging.getLogger(__name__)
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logger.info("Using psycopg (psycopg3) for PostgreSQL connections")
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logger.info("Using psycopg (psycopg3) with ConnectionPool for PostgreSQL connections")
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except ImportError:
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except ImportError:
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try:
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try:
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import psycopg2
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from psycopg2.extras import Json, execute_values
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from psycopg2.extras import execute_values, Json
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from psycopg2.pool import ThreadedConnectionPool as ConnectionPool
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PSYCOPG_VERSION = 2
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PSYCOPG_VERSION = 2
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logger = logging.getLogger(__name__)
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logger = logging.getLogger(__name__)
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logger.info("Using psycopg2 for PostgreSQL connections")
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logger.info("Using psycopg2 with ThreadedConnectionPool for PostgreSQL connections")
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except ImportError:
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except ImportError:
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raise ImportError(
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raise ImportError(
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"Neither 'psycopg' nor 'psycopg2' library is available. "
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"Neither 'psycopg' nor 'psycopg2' library is available. "
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"Please install one of them using 'pip install psycopg' or 'pip install psycopg2'."
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"Please install one of them using 'pip install psycopg[pool]' or 'pip install psycopg2'"
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)
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)
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from mem0.vector_stores.base import VectorStoreBase
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from mem0.vector_stores.base import VectorStoreBase
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@@ -48,6 +48,8 @@ class PGVector(VectorStoreBase):
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port,
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port,
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diskann,
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diskann,
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hnsw,
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hnsw,
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minconn=1,
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maxconn=5,
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sslmode=None,
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sslmode=None,
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connection_string=None,
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connection_string=None,
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connection_pool=None,
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connection_pool=None,
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@@ -65,6 +67,8 @@ class PGVector(VectorStoreBase):
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port (int, optional): Database port
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port (int, optional): Database port
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diskann (bool, optional): Use DiskANN for faster search
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diskann (bool, optional): Use DiskANN for faster search
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hnsw (bool, optional): Use HNSW for faster search
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hnsw (bool, optional): Use HNSW for faster search
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minconn (int): Minimum number of connections to keep in the connection pool
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maxconn (int): Maximum number of connections allowed in the connection pool
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sslmode (str, optional): SSL mode for PostgreSQL connection (e.g., 'require', 'prefer', 'disable')
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sslmode (str, optional): SSL mode for PostgreSQL connection (e.g., 'require', 'prefer', 'disable')
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connection_string (str, optional): PostgreSQL connection string (overrides individual connection parameters)
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connection_string (str, optional): PostgreSQL connection string (overrides individual connection parameters)
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connection_pool (Any, optional): psycopg2 connection pool object (overrides connection string and individual parameters)
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connection_pool (Any, optional): psycopg2 connection pool object (overrides connection string and individual parameters)
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@@ -73,14 +77,13 @@ class PGVector(VectorStoreBase):
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self.use_diskann = diskann
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self.use_diskann = diskann
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self.use_hnsw = hnsw
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self.use_hnsw = hnsw
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self.embedding_model_dims = embedding_model_dims
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self.embedding_model_dims = embedding_model_dims
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self.connection_pool = None
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# Connection setup with priority: connection_pool > connection_string > individual parameters
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# Connection setup with priority: connection_pool > connection_string > individual parameters
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if connection_pool is not None:
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if connection_pool is not None:
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# Use provided connection pool
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# Use provided connection pool
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self.conn = connection_pool.getconn()
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self.connection_pool = connection_pool
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self.connection_pool = connection_pool
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elif connection_string is not None:
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elif connection_string:
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# Use connection string
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if sslmode:
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if sslmode:
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# Append sslmode to connection string if provided
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# Append sslmode to connection string if provided
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if 'sslmode=' in connection_string:
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if 'sslmode=' in connection_string:
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@@ -90,99 +93,119 @@ class PGVector(VectorStoreBase):
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else:
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else:
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# Add sslmode to connection string
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# Add sslmode to connection string
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connection_string = f"{connection_string} sslmode={sslmode}"
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connection_string = f"{connection_string} sslmode={sslmode}"
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if PSYCOPG_VERSION == 3:
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self.conn = psycopg.connect(connection_string)
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else:
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self.conn = psycopg2.connect(connection_string)
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self.connection_pool = None
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else:
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else:
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# Use individual connection parameters
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connection_string = f"postgresql://{user}:{password}@{host}:{port}/{dbname}"
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conn_params = {
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'dbname': dbname,
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'user': user,
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'password': password,
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'host': host,
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'port': port
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}
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if sslmode:
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if sslmode:
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conn_params['sslmode'] = sslmode
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connection_string = f"{connection_string} sslmode={sslmode}"
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if self.connection_pool is None:
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if PSYCOPG_VERSION == 3:
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if PSYCOPG_VERSION == 3:
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self.conn = psycopg.connect(**conn_params)
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# psycopg3 ConnectionPool
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self.connection_pool = ConnectionPool(conninfo=connection_string, min_size=minconn, max_size=maxconn, open=True)
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else:
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else:
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self.conn = psycopg2.connect(**conn_params)
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# psycopg2 ThreadedConnectionPool
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self.connection_pool = None
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self.connection_pool = ConnectionPool(minconn=minconn, maxconn=maxconn, dsn=connection_string)
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self.cur = self.conn.cursor()
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collections = self.list_cols()
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collections = self.list_cols()
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if collection_name not in collections:
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if collection_name not in collections:
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self.create_col(embedding_model_dims)
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self.create_col()
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def create_col(self, embedding_model_dims):
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@contextmanager
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def _get_cursor(self, commit: bool = False):
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"""
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Unified context manager to get a cursor from the appropriate pool.
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Auto-commits or rolls back based on exception, and returns the connection to the pool.
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"""
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if PSYCOPG_VERSION == 3:
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# psycopg3 auto-manages commit/rollback and pool return
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with self.connection_pool.connection() as conn:
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with conn.cursor() as cur:
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try:
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yield cur
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if commit:
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conn.commit()
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except Exception:
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conn.rollback()
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logger.error("Error in cursor context (psycopg3)", exc_info=True)
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raise
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else:
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# psycopg2 manual getconn/putconn
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conn = self.connection_pool.getconn()
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cur = conn.cursor()
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try:
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yield cur
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if commit:
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conn.commit()
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except Exception as exc:
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conn.rollback()
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logger.error(f"Error occurred: {exc}")
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raise exc
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finally:
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cur.close()
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self.connection_pool.putconn(conn)
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def create_col(self) -> None:
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"""
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"""
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Create a new collection (table in PostgreSQL).
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Create a new collection (table in PostgreSQL).
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Will also initialize vector search index if specified.
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Will also initialize vector search index if specified.
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Args:
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embedding_model_dims (int): Dimension of the embedding vector.
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"""
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"""
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self.cur.execute("CREATE EXTENSION IF NOT EXISTS vector")
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with self._get_cursor(commit=True) as cur:
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self.cur.execute(
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cur.execute("CREATE EXTENSION IF NOT EXISTS vector")
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f"""
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cur.execute(
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CREATE TABLE IF NOT EXISTS {self.collection_name} (
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id UUID PRIMARY KEY,
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vector vector({embedding_model_dims}),
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payload JSONB
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);
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"""
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)
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if self.use_diskann and embedding_model_dims < 2000:
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# Check if vectorscale extension is installed
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self.cur.execute("SELECT * FROM pg_extension WHERE extname = 'vectorscale'")
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if self.cur.fetchone():
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# Create DiskANN index if extension is installed for faster search
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self.cur.execute(
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f"""
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CREATE INDEX IF NOT EXISTS {self.collection_name}_diskann_idx
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ON {self.collection_name}
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USING diskann (vector);
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"""
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)
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elif self.use_hnsw:
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self.cur.execute(
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f"""
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f"""
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CREATE INDEX IF NOT EXISTS {self.collection_name}_hnsw_idx
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CREATE TABLE IF NOT EXISTS {self.collection_name} (
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ON {self.collection_name}
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id UUID PRIMARY KEY,
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USING hnsw (vector vector_cosine_ops)
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vector vector({self.embedding_model_dims}),
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"""
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payload JSONB
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);
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"""
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)
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)
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if self.use_diskann and self.embedding_model_dims < 2000:
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cur.execute("SELECT * FROM pg_extension WHERE extname = 'vectorscale'")
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if cur.fetchone():
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# Create DiskANN index if extension is installed for faster search
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cur.execute(
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f"""
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CREATE INDEX IF NOT EXISTS {self.collection_name}_diskann_idx
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ON {self.collection_name}
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USING diskann (vector);
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"""
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)
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elif self.use_hnsw:
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cur.execute(
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f"""
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CREATE INDEX IF NOT EXISTS {self.collection_name}_hnsw_idx
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ON {self.collection_name}
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USING hnsw (vector vector_cosine_ops)
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"""
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)
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self.conn.commit()
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def insert(self, vectors: list[list[float]], payloads=None, ids=None) -> None:
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def insert(self, vectors, payloads=None, ids=None):
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"""
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Insert vectors into a collection.
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Args:
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vectors (List[List[float]]): List of vectors to insert.
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payloads (List[Dict], optional): List of payloads corresponding to vectors.
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ids (List[str], optional): List of IDs corresponding to vectors.
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"""
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logger.info(f"Inserting {len(vectors)} vectors into collection {self.collection_name}")
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logger.info(f"Inserting {len(vectors)} vectors into collection {self.collection_name}")
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json_payloads = [json.dumps(payload) for payload in payloads]
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json_payloads = [json.dumps(payload) for payload in payloads]
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data = [(id, vector, payload) for id, vector, payload in zip(ids, vectors, json_payloads)]
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data = [(id, vector, payload) for id, vector, payload in zip(ids, vectors, json_payloads)]
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execute_values(
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if PSYCOPG_VERSION == 3:
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self.cur,
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with self._get_cursor(commit=True) as cur:
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f"INSERT INTO {self.collection_name} (id, vector, payload) VALUES %s",
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cur.executemany(
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data,
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f"INSERT INTO {self.collection_name} (id, vector, payload) VALUES (%s, %s, %s)",
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)
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data,
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self.conn.commit()
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)
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else:
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with self._get_cursor(commit=True) as cur:
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execute_values(
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cur,
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f"INSERT INTO {self.collection_name} (id, vector, payload) VALUES %s",
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data,
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)
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def search(self, query, vectors, limit=5, filters=None):
|
def search(
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|
self,
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|
query: str,
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|
vectors: list[float],
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|
limit: Optional[int] = 5,
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|
filters: Optional[dict] = None,
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|
) -> List[OutputData]:
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"""
|
"""
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Search for similar vectors.
|
Search for similar vectors.
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|
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@@ -205,31 +228,37 @@ class PGVector(VectorStoreBase):
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|
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filter_clause = "WHERE " + " AND ".join(filter_conditions) if filter_conditions else ""
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filter_clause = "WHERE " + " AND ".join(filter_conditions) if filter_conditions else ""
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|
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self.cur.execute(
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with self._get_cursor() as cur:
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f"""
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cur.execute(
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SELECT id, vector <=> %s::vector AS distance, payload
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f"""
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FROM {self.collection_name}
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SELECT id, vector <=> %s::vector AS distance, payload
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{filter_clause}
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FROM {self.collection_name}
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ORDER BY distance
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{filter_clause}
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LIMIT %s
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ORDER BY distance
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""",
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LIMIT %s
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(vectors, *filter_params, limit),
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""",
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)
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(vectors, *filter_params, limit),
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)
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results = self.cur.fetchall()
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results = cur.fetchall()
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return [OutputData(id=str(r[0]), score=float(r[1]), payload=r[2]) for r in results]
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return [OutputData(id=str(r[0]), score=float(r[1]), payload=r[2]) for r in results]
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def delete(self, vector_id):
|
def delete(self, vector_id: str) -> None:
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"""
|
"""
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Delete a vector by ID.
|
Delete a vector by ID.
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|
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Args:
|
Args:
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vector_id (str): ID of the vector to delete.
|
vector_id (str): ID of the vector to delete.
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"""
|
"""
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self.cur.execute(f"DELETE FROM {self.collection_name} WHERE id = %s", (vector_id,))
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with self._get_cursor(commit=True) as cur:
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self.conn.commit()
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cur.execute(f"DELETE FROM {self.collection_name} WHERE id = %s", (vector_id,))
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|
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def update(self, vector_id, vector=None, payload=None):
|
def update(
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|
self,
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|
vector_id: str,
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|
vector: Optional[list[float]] = None,
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|
payload: Optional[dict] = None,
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|
) -> None:
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"""
|
"""
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Update a vector and its payload.
|
Update a vector and its payload.
|
||||||
|
|
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@@ -238,28 +267,29 @@ class PGVector(VectorStoreBase):
|
|||||||
vector (List[float], optional): Updated vector.
|
vector (List[float], optional): Updated vector.
|
||||||
payload (Dict, optional): Updated payload.
|
payload (Dict, optional): Updated payload.
|
||||||
"""
|
"""
|
||||||
if vector:
|
with self._get_cursor(commit=True) as cur:
|
||||||
self.cur.execute(
|
if vector:
|
||||||
f"UPDATE {self.collection_name} SET vector = %s WHERE id = %s",
|
cur.execute(
|
||||||
(vector, vector_id),
|
f"UPDATE {self.collection_name} SET vector = %s WHERE id = %s",
|
||||||
)
|
(vector, vector_id),
|
||||||
if payload:
|
|
||||||
# Handle JSON serialization based on psycopg version
|
|
||||||
if PSYCOPG_VERSION == 3:
|
|
||||||
# psycopg3 uses psycopg.types.json.Json
|
|
||||||
self.cur.execute(
|
|
||||||
f"UPDATE {self.collection_name} SET payload = %s WHERE id = %s",
|
|
||||||
(Json(payload), vector_id),
|
|
||||||
)
|
)
|
||||||
else:
|
if payload:
|
||||||
# psycopg2 uses psycopg2.extras.Json
|
# Handle JSON serialization based on psycopg version
|
||||||
self.cur.execute(
|
if PSYCOPG_VERSION == 3:
|
||||||
f"UPDATE {self.collection_name} SET payload = %s WHERE id = %s",
|
# psycopg3 uses psycopg.types.json.Json
|
||||||
(psycopg2.extras.Json(payload), vector_id),
|
cur.execute(
|
||||||
)
|
f"UPDATE {self.collection_name} SET payload = %s WHERE id = %s",
|
||||||
self.conn.commit()
|
(Json(payload), vector_id),
|
||||||
|
)
|
||||||
|
else:
|
||||||
|
# psycopg2 uses psycopg2.extras.Json
|
||||||
|
cur.execute(
|
||||||
|
f"UPDATE {self.collection_name} SET payload = %s WHERE id = %s",
|
||||||
|
(Json(payload), vector_id),
|
||||||
|
)
|
||||||
|
|
||||||
def get(self, vector_id) -> OutputData:
|
|
||||||
|
def get(self, vector_id: str) -> OutputData:
|
||||||
"""
|
"""
|
||||||
Retrieve a vector by ID.
|
Retrieve a vector by ID.
|
||||||
|
|
||||||
@@ -269,14 +299,15 @@ class PGVector(VectorStoreBase):
|
|||||||
Returns:
|
Returns:
|
||||||
OutputData: Retrieved vector.
|
OutputData: Retrieved vector.
|
||||||
"""
|
"""
|
||||||
self.cur.execute(
|
with self._get_cursor() as cur:
|
||||||
f"SELECT id, vector, payload FROM {self.collection_name} WHERE id = %s",
|
cur.execute(
|
||||||
(vector_id,),
|
f"SELECT id, vector, payload FROM {self.collection_name} WHERE id = %s",
|
||||||
)
|
(vector_id,),
|
||||||
result = self.cur.fetchone()
|
)
|
||||||
if not result:
|
result = cur.fetchone()
|
||||||
return None
|
if not result:
|
||||||
return OutputData(id=str(result[0]), score=None, payload=result[2])
|
return None
|
||||||
|
return OutputData(id=str(result[0]), score=None, payload=result[2])
|
||||||
|
|
||||||
def list_cols(self) -> List[str]:
|
def list_cols(self) -> List[str]:
|
||||||
"""
|
"""
|
||||||
@@ -285,36 +316,42 @@ class PGVector(VectorStoreBase):
|
|||||||
Returns:
|
Returns:
|
||||||
List[str]: List of collection names.
|
List[str]: List of collection names.
|
||||||
"""
|
"""
|
||||||
self.cur.execute("SELECT table_name FROM information_schema.tables WHERE table_schema = 'public'")
|
with self._get_cursor() as cur:
|
||||||
return [row[0] for row in self.cur.fetchall()]
|
cur.execute("SELECT table_name FROM information_schema.tables WHERE table_schema = 'public'")
|
||||||
|
return [row[0] for row in cur.fetchall()]
|
||||||
|
|
||||||
def delete_col(self):
|
def delete_col(self) -> None:
|
||||||
"""Delete a collection."""
|
"""Delete a collection."""
|
||||||
self.cur.execute(f"DROP TABLE IF EXISTS {self.collection_name}")
|
with self._get_cursor(commit=True) as cur:
|
||||||
self.conn.commit()
|
cur.execute(f"DROP TABLE IF EXISTS {self.collection_name}")
|
||||||
|
|
||||||
def col_info(self):
|
def col_info(self) -> dict[str, Any]:
|
||||||
"""
|
"""
|
||||||
Get information about a collection.
|
Get information about a collection.
|
||||||
|
|
||||||
Returns:
|
Returns:
|
||||||
Dict[str, Any]: Collection information.
|
Dict[str, Any]: Collection information.
|
||||||
"""
|
"""
|
||||||
self.cur.execute(
|
with self._get_cursor() as cur:
|
||||||
f"""
|
cur.execute(
|
||||||
SELECT
|
f"""
|
||||||
table_name,
|
SELECT
|
||||||
(SELECT COUNT(*) FROM {self.collection_name}) as row_count,
|
table_name,
|
||||||
(SELECT pg_size_pretty(pg_total_relation_size('{self.collection_name}'))) as total_size
|
(SELECT COUNT(*) FROM {self.collection_name}) as row_count,
|
||||||
FROM information_schema.tables
|
(SELECT pg_size_pretty(pg_total_relation_size('{self.collection_name}'))) as total_size
|
||||||
WHERE table_schema = 'public' AND table_name = %s
|
FROM information_schema.tables
|
||||||
""",
|
WHERE table_schema = 'public' AND table_name = %s
|
||||||
(self.collection_name,),
|
""",
|
||||||
)
|
(self.collection_name,),
|
||||||
result = self.cur.fetchone()
|
)
|
||||||
|
result = cur.fetchone()
|
||||||
return {"name": result[0], "count": result[1], "size": result[2]}
|
return {"name": result[0], "count": result[1], "size": result[2]}
|
||||||
|
|
||||||
def list(self, filters=None, limit=100):
|
def list(
|
||||||
|
self,
|
||||||
|
filters: Optional[dict] = None,
|
||||||
|
limit: Optional[int] = 100
|
||||||
|
) -> List[OutputData]:
|
||||||
"""
|
"""
|
||||||
List all vectors in a collection.
|
List all vectors in a collection.
|
||||||
|
|
||||||
@@ -342,27 +379,26 @@ class PGVector(VectorStoreBase):
|
|||||||
LIMIT %s
|
LIMIT %s
|
||||||
"""
|
"""
|
||||||
|
|
||||||
self.cur.execute(query, (*filter_params, limit))
|
with self._get_cursor() as cur:
|
||||||
|
cur.execute(query, (*filter_params, limit))
|
||||||
results = self.cur.fetchall()
|
results = cur.fetchall()
|
||||||
return [[OutputData(id=str(r[0]), score=None, payload=r[2]) for r in results]]
|
return [[OutputData(id=str(r[0]), score=None, payload=r[2]) for r in results]]
|
||||||
|
|
||||||
def __del__(self):
|
def __del__(self) -> None:
|
||||||
"""
|
"""
|
||||||
Close the database connection when the object is deleted.
|
Close the database connection pool when the object is deleted.
|
||||||
"""
|
"""
|
||||||
if hasattr(self, "cur"):
|
try:
|
||||||
self.cur.close()
|
# Close pool appropriately
|
||||||
if hasattr(self, "conn"):
|
if PSYCOPG_VERSION == 3:
|
||||||
if hasattr(self, "connection_pool") and self.connection_pool is not None:
|
self.connection_pool.close()
|
||||||
# Return connection to pool instead of closing it
|
|
||||||
self.connection_pool.putconn(self.conn)
|
|
||||||
else:
|
else:
|
||||||
# Close the connection directly
|
self.connection_pool.closeall()
|
||||||
self.conn.close()
|
except Exception:
|
||||||
|
pass
|
||||||
|
|
||||||
def reset(self):
|
def reset(self) -> None:
|
||||||
"""Reset the index by deleting and recreating it."""
|
"""Reset the index by deleting and recreating it."""
|
||||||
logger.warning(f"Resetting index {self.collection_name}...")
|
logger.warning(f"Resetting index {self.collection_name}...")
|
||||||
self.delete_col()
|
self.delete_col()
|
||||||
self.create_col(self.embedding_model_dims)
|
self.create_col()
|
||||||
|
|||||||
@@ -39,6 +39,7 @@ vector_stores = [
|
|||||||
"upstash-vector>=0.1.0",
|
"upstash-vector>=0.1.0",
|
||||||
"azure-search-documents>=11.4.0b8",
|
"azure-search-documents>=11.4.0b8",
|
||||||
"psycopg>=3.2.8",
|
"psycopg>=3.2.8",
|
||||||
|
"psycopg-pool>=3.2.6,<4.0.0",
|
||||||
"pymongo>=4.13.2",
|
"pymongo>=4.13.2",
|
||||||
"pymochow>=2.2.9",
|
"pymochow>=2.2.9",
|
||||||
"databricks-sdk>=0.63.0",
|
"databricks-sdk>=0.63.0",
|
||||||
|
|||||||
+1242
-216
File diff suppressed because it is too large
Load Diff
Reference in New Issue
Block a user